Computational Biology
(BIOSC 1540)
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Programming+
Module 3
: Physical modeling
Module 1
: Search and similarity
L1.1
: Orientation
L1.2
: The digital genome
L1.3
: Sequence similarity
L1.4
: Sequence alignment
L1.5
: Heuristic search
L1.6
: Read mapping
Module 2
: Signal detection
L2.1
: Signals in Sequences
L2.2
: Signal or Noise?
L2.3
: RNA quantification
L2.4
: Differential Gene Expression
L2.5
: Beyond the Bulk
Module 3
: Physical modeling
L3.1
: Protein structure
L3.2
: Energy landscapes
L3.3
: Molecular dynamics
L3.4
: Structural analysis
L3.5
: Structure prediction
Module 4
: Cheminformatics
L4.1
: Target identification
L4.2
: The language of chemistry
L4.3
: Molecular descriptors
L4.4
: Molecular similarity
L4.5
: Molecular property prediction
L4.6
: Protein-ligand docking
Module 3
Physical modeling
L3.1
Protein structure
Thu Oct 8
Slides
L3.2
Energy landscapes
Tue Oct 13
Slides
L3.3
Molecular dynamics
Thu Oct 15
Slides
L3.4
Structural analysis
Tue Oct 20
L3.5
Structure prediction
Thu Oct 22
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L2.5
: Beyond the Bulk
L3.1
: Protein structure